Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015948371.1_cds_XP_016489656.1_80156
CDS Infomation

[gene=LOC107809519] [db_xref=GeneID:107809519] [protein=probable E3 ubiquitin-protein ligase XBOS32] [partial=3'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016489656.1] [location=join(7990..8208,8328..8387,8688..8759,8906..9081,9174..9334,10348..10406,10505..10551,11608..11748,11893..11984,12333..>12690)] [gbkey=CDS]
Sequence

ATGCCCGAACGATATCCGAAAACTATGCGATTTTTGAGCCTTGTTGGGAATTCATTCGGA
TGTTCTGCATCAGGCGAGCGATTGGTTTCTGCTGCTAGAGATGGTGATCTTCAGGAAGCC
AAGGCTTTACTGGAGTATAATCCTCGGTTAGTGAGGTATTCCACTTTTGGTGTTCGAAAT
TCACCCCTCCATTACTCTGCCGCCCAAGGACATCACGAGATTGTTACTCTCTTGCTTGAG
TCTGGAGTTGACATCAATCTCAGAAACTACCGGGGGCAGACAGCACTGATGCAAGCCTGT
CAGTATGGTCACTGGGAAGTTGTTCAGAGCCTCATTCTTTTCAAAGCCAATATTCATAGG
GCTGATTATCTCAATGGAGGCACGGCGCTTCATTTAGCTTCTCTGAATGGACATTCCCGA
TGTATACGGCTTCTCCTTGCTGATTATATTCCTAGCATTCCTAATTTCTGTAATGTCATG
AGAAAGAGATCGAGAAATGAGGACTCAATACAAGAATTTGATGACTTTGCACTGCATGAG
GTGATCAATAGACCTGCCGATGGTGGGATTACCGCCCTTCATATGGCAGCACTGAACGGC
CATGTTGAAAGTCTGCAGCTACTCTTGGACTTAGGGGCTTCTGTCACTAAGGTTACTGTG
GAAGACGGGACTACAATTGATTTGATAGGTGCAGGAAGTACACCACTTCATTATGCTGCA
TGTGGCGGGAATGCTCAGTGTTGTCAGCTTTTAATTGCCAGGGGTGCGAGTCTCAACGCA
GAAAATGCGAATGGGTGGACCCCATTGATGGTTGCTCGATCATGGCATAGAGATGGGCTC
GAGGAAATTTTAAGTGCTCGTCCAGAAAGGCAACCACGTCCTCTTCCTTCACCGTTCTTA
TGCCTCCCTCTTATGAGTATAGTGAAGATTGCTAGAGAATGTGGATGGAGAACAAATGAT
TTGCCATCAACTTGTTTAGATCCTTGTGTTGTTTGTCTGGAAAGGAAGTGTGCAGTCGCT
GCAGAGGGTTGTTTTCACAAGTTCTGCACGCGCTGTGCATTGTACCTATGTTCCACCAGC
AGCACCTCAACTGCGGCACATGGTCCTCCGGGCTCGATTCCCTGCCCTTTATGCCGACAT
GGCATCGTTTCATTTGTTAAGCTGGCGGATACAATGCCAATCATCAAGGAAGCAGCGAGA
ACAAGCCTATCATTGCCGTTCTGTACATGTACAGCTGATGGACAAGAACCAACTACATTG
GAAACGCCATTTTGCAAGCCGGATTTATATTGCTCTCGATTCTCCCCTCTTGGCTCTTCC
TTCCGCTCATTAAGCTGCCAAAAGTTCCCGGCCTTGAAGTTCAGCCCCGGCCTTTGTATG
GGAAC

Peptide Sequence

PEP ID

XP_016489656.1
PEP Infomation

PREDICTED: probable E3 ubiquitin-protein ligase XBOS32 [Nicotiana tabacum]
Sequence

MPERYPKTMRFLSLVGNSFGCSASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRN
SPLHYSAAQGHHEIVTLLLESGVDINLRNYRGQTALMQACQYGHWEVVQSLILFKANIHR
ADYLNGGTALHLASLNGHSRCIRLLLADYIPSIPNFCNVMRKRSRNEDSIQEFDDFALHE
VINRPADGGITALHMAALNGHVESLQLLLDLGASVTKVTVEDGTTIDLIGAGSTPLHYAA
CGGNAQCCQLLIARGASLNAENANGWTPLMVARSWHRDGLEEILSARPERQPRPLPSPFL
CLPLMSIVKIARECGWRTNDLPSTCLDPCVVCLERKCAVAAEGCFHKFCTRCALYLCSTS
STSTAAHGPPGSIPCPLCRHGIVSFVKLADTMPIIKEAARTSLSLPFCTCTADGQEPTTL
ETPFCKPDLYCSRFSPLGSSFRSLSCQKFPALKFSPGLCMGTSDTSPSLVPIQRPGLNFK
AGNF

Transcript Sequence

Gene sequence data has not been registered.